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SERVICES

Bioself is specialized in biocuration. Biocuration has become an essential part of biological discovery and biomedical research, the activity of organizing, representing and making biological information accessible to both humans and computers. 

The start-up has developed three axes :

              Data Formalization

              Data Management

              Science Communication

 

Bioself, society expert in biocuration, offers services in this field of activity.

 

Bioself

Biocuration & 
Communication Services
 
Data Formalization
Data Management
Science Communication
 

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ABOUT ME

After obtaining a Masters in Bioinformatics in 2005, I joined the CNRS (France) in 2006 as a research engineer in biological data processing at the Institute of Developmental Biology of Marseille-Luminy. I joined the team of Patrick Lemaire, whose studies the ascidian developmental program with an integrative approach tested. When I arrived, the structure of the ANISEED database (ascidian Network for In Situ Expression and Embryological Data) was designed to represent and model the development of the ascidian. My tasks were 1) Data formalization, curation and management from ascidian research, 2) Networking activities to mobilize the scientific community around common tools, 3) ANISEED development and improvement and system documentation. Since, ANISEED became the reference database for the tunicate community.


After completing 5 years and 11 months in short term contract in the academic institute, I decided to create Bioself to provide a sustainable manner my experience and engineering skills in biological data processing and scientific communication. 

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ABOUT ME

After obtaining a Masters in Bioinformatics in 2005, I joined the CNRS (France) in 2006 as biocurator at the Institute of Developmental Biology of Marseille. I joined the team of Patrick Lemaire, whose studies the ascidian developmental program with an integrative approach. When I arrived, the structure of the ANISEED database (Ascidian Network for In Situ Expression and Embryological Data) was designed to represent and model the ascidian development. My tasks were 1) Data formalization, curation and management from ascidian research, 2) Networking activities to mobilize the scientific community around common tools, 3) ANISEED development and improvement, system documentation. Since, ANISEED became the reference database for the tunicate community.


In 2012, after completing 5 years and 11 months in short term contract in the academic institute, I decided to create Bioself to provide a sustainable manner my experience and engineering skills in biological data processing and scientific communication. 

 

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ARTICLES

Nucleic Acids Res. 2020
Nucleic Acids Res. 2020

ANISEED 2019: 4D Exploration of Genetic Data for an Extended Range of Tunicates

Nature Biotechnology. 2019
Nature Biotechnology. 2019

FAIRsharing as a Community Approach to Standards, Repositories and Policies

Nature Biotechnology. 2008
Nature Biotechnology. 2008

Minimum information specification for in situ hybridization and immunohistochemestry experiments (MISFISHIE).

Nucleic Acids Res. 2020
Nucleic Acids Res. 2020

ANISEED 2019: 4D Exploration of Genetic Data for an Extended Range of Tunicates

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MY CLIENTS

 
 
 

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